Yes, I have. I'm going to post some pictures so everyone gets a better idea of what's going on:

It is unable to recognize any networks, but the card is enabled and "on", and the radio is functioning, it just cannot detect networks.

This is the old card. It has an "AUX" (Auxilary) and a "MAIN" input. The black wire went to the MAIN, and the white went to the AUX.

This is what the new card looks like in the unit. The intel 5300 has three inputs. I have tried many different configurations with the wires and none have worked.
The computer POSTs fine when booting up. I really think this has something to do with the antennas, but there is no literature or anything around that explains anything about antennas and if the card actually can function with just two. The only thing I can think of is to call Intel, but I know that will prove fruitless...